Paris-Saclay

LabEx SPS

Genopole Evry

CNRS



Accueil > Plateformes > Plateforme Transcriptomique > Communication

Archives 2003 - 2012

Platform Publications

Plant Cell2012 Mutations in the Arabidopsis Homolog of LST8/GβL, a Partner of the Target of Rapamycin Kinase, Impair Plant Growth, Flowering, and Metabolic Adaptation to Long Days. Moreau M, Azzopardi M, Clément G, Dobrenel T, Marchive C, Renne C, Martin-Magniette ML, Taconnat L, Renou JP, Robaglia C, Meyer C. PlantCell FEb3, 2012
PubMed

Plant J. 2012 Elongation-related functions of LEAFY COTYLEDON1 during the development of Arabidopsis thaliana. Junker A, Mönke G, Rutten T, Keilwagen J, Seifert M, Thi TM, Renou JP, Balzergue S, Viehöver P, Hähnel U, Ludwig-Müller J, Altschmied L, Conrad U, Weisshaar B, Bäumlein H. Plant J. 2012 Mar 16
PubMed

New Phytol. 2012 Plant genes involved in harbouring symbiotic rhizobia or pathogenic nematodes.Damiani I, Baldacci-Cresp F, Hopkins J, Andrio E, Balzergue S, Lecomte P, Puppo A, Abad P, Favery B,
Hérouart D. New Phytol. 2012 Apr ;194(2):511-22

Plant J. 2012 Inducible NAD overproduction in Arabidopsis alters metabolic pools and gene expression correlated
with increased salicylate content and resistance to Pst-AvrRpm1. Pétriacq P, de Bont L, Hager J, Didierlaurent L, Mauve C, Guérard F, Noctor G, Pelletier S, Renou JP,
Tcherkez G, Gakière B. Plant J. 2012 Jan 23.
PubMed

New Phytol. 2012 Phytosphingosine-phosphate is a signal for AtMPK6 activation and Arabidopsis response to chilling.Dutilleul C, Benhassaine-Kesri G, Demandre C, Rézé N, Launay A, Pelletier S, Renou JP,
Zachowski A, Baudouin E, Guillas I.New Phytol. 2012 Apr ;194(1):181-91
PubMed

Mol Plant Microbe Interact. 2012 EDS1 Contributes to Nonhost Resistance of Arabidopsis thaliana Against Erwinia
amylovora. Moreau M, Degrave A, Vedel R, Bitton F, Patrit O, Renou JP, Barny MA, Fagard M. Mol Plant Microbe Interact. 2012 Mar ;25(3):421-30.
PubMed

BMC Genomics 2012 "Expression variation in connected recombinant populations of Arabidopsis thaliana highlights
distinct transcriptome architectures. Francisco A Cubillos, Jennifer Yansouni, Hamid Khalili, Sandrine Balzergue, Samira Elftieh, Marie-Laure Martin-Magniette, Yann Serrand, Loic Lepiniec, Sebastien Baud, Bertrand Dubreucq, Jean-Pierre Renou, Christine Camilleri and Olivier Loudet
PubMed

PLoS Genetics 2012 Histone H2B monoubiquitination facilitates the rapid modulation of gene expression during Arabidopsis photomorphogenesis Clara Bourbousse#, Ikhlak Ahmed#, François Roudier, Gérald Zabulon,
Eddy Blondet, Sandrine Balzergue, Vincent Colot, Chris Bowler and Frédy Barneche
PubMed

Eur J Plant Pathol 2012 Geminivirus C2 protein represses genes involved in sulphur assimilation and this effect can be counteracted by jasmonate treatment ;Rosa Lozano-Durán, Irene Garcia, Stéphanie Huguet, Sandrine Balzergue,
Luís Romero & Eduardo R. Bejarano Eur J Plant Pathol 2012

Plant Science 2012 "Kinetic transcriptomic approach revealed metabolic pathways and genotoxic-related changes implied in the Arabidopsis response to ionising radiations.Morgane Gicquel 1, Ludivine Taconnat 2, Jean-Pierre Renou 2§, Marie-Andrée Esnault 1, Francisco Cabello-Hurtado 1.

PubMed

PLOS one 2012 Ruben Puga-Freitas ; Sébastien Barot ; Ludivine Taconnat ; Jean-Pierre Renou ; Manuel Blouin, Ph.D, Signal molecules mediate the impact of the earthworm Aporrectodea caliginosa on growth, development and defence
of the plant Arabidopsis thaliana.
PubMed

New Phytol. 2012 C2 from Beet curly top virus promotes a cell environment suitable for efficient replication of geminiviruses, providing a novel mechanism of viral synergism. Caracuel Z, Lozano-Durán R, Huguet S,
Arroyo-Mateos M, Rodríguez-Negrete EA, Bejarano ER. New Phytol. 2012 May ;194(3):846-58
PubMed

Plant J. 2012 Nov 26 Arabidopsis A BOUT DE SOUFFLE is a putative mitochondrial transporter involved in photorespiratory metabolism and is required for meristem growth at ambient CO(2) levels.Eisenhut M, Planchais S,
Cabassa C, Guivarc’h A, Justin AM, Taconnat L, Renou JP, Linka M, Gagneul D, Timm S, Bauwe H, Carol P, Weber AP.
PubMed

BMC Plant Biol. 2012 Nov Identification of genes involved in the ACC-mediated control of root cell elongation in Arabidopsis thaliana.Markakis MN, De Cnodder T, Lewandowski M, Simon D, Boron A, Balcerowicz D, Doubbo T,
Taconnat L, Renou JP, Höfte H, Verbelen JP, Vissenberg K.
PubMed

Plant Sci. 2012 Oct Kinetic transcriptomic approach revealed metabolic pathways and genotoxic-related changes implied in the Arabidopsis response to ionising radiations.Gicquel M, Taconnat L, Renou JP, Esnault MA,
Cabello-Hurtado F.
PubMed

Plant Cell Environ. 2012 Nov Gama-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots. Renault H, El Amrani A, Berger A,
Mouille G, Soubigou-Taconnat L, Bouchereau A, Deleu C.
PubMed

Plant, Cell & environment 2012 GABA Transaminase Deficiency Impairs Central Carbon Metabolism and Leads to Cell Wall Defects During Salt Stress in Arabidopsis Roots, Hugues Renault1,2,†,*, Abdelhak El Amrani2, Adeline Berger3, Ludivine Soubigou-Taconnat4, Alain Bouchereau1, Carole Deleu.

Dubois A, Remay A, Raymond O, Balzergue S, Chauvet A, Maene M, Pécrix Y, Yang SH, Jeauffre J, Thouroude T, Boltz V, Martin-Magniette ML, Janczarski S, Legeai F, Renou JP, Vergne P, Le Bris M, Foucher F, Bendahmane M.
Genomic approach to study floral development genes in Rosa sp.
PLoS One. 2011 ;6(12):e28455. Epub 2011 Dec 14.
PubMed.

Pont C, Murat F, Confolent C, Balzergue S, Salse J. 2011
RNA-seq in grain unveils fate of neo- and paleopolyploidization events in bread wheat (Triticum aestivum L.).
Genome Biol.
PubMed

Tamasloukht B, Wong Quai Lam MS, Martinez Y, Tozo K, Barbier O, Jourda C, Jauneau A, Borderies G, Balzergue S, Renou JP, Huguet S, Martinant JP, Tatout C, Lapierre C, Barrière Y, Goffner D, Pichon M. 2011
Characterization of a cinnamoyl-CoA reductase 1 (CCR1) mutant in maize : effects on lignification, fibre development, and global gene expression
Journal of Experimental Botany WOS:000292838700012
PubMed

Yu Y, Streubel J, Balzergue S, Champion A, Boch J, Koebnik R, Feng J, Verdier V, Szurek B. 2011
Colonization of rice leaf blades by an African strain of Xanthomonas oryzae pv. Oryzae depends on a new TAL effector which induces the rice
Molecular Plant-Microbe Interaction WOS:000293878600011
PubMed

Quraishi UM, Murat F, Abrouk M, Pont C, Confolent C, Oury FX, Ward J, Boros D, Gebruers K, Delcour JA, Courtin CM, Bedo Z, Saulnier L, Guillon F, Balzergue S, Shewry PR, Feuillet C, Charmet G, Salse J. 2011
Combined meta-genomics analyses unravel candidate genes for the grain dietary fiber content in bread wheat (Triticum aestivum L.).
Functional and Integrative Genomics WOS:000289725000007
PubMed

Latrasse D, Germann S, Houba-Hérin N, Dubois E, Bui-Prodhomme D, Hourcade D, Juul-Jensen T, Le Roux C, Majira A, Simoncello N, Granier F, Taconnat L, Renou JP, Gaudin V. 2011
Control of Flowering and Cell Fate by LIF2, an RNA Binding Partner of the Polycomb Complex Component LHP1
Plos One WOS:000286834300094
PubMed

Cheminant S, Wild M, Bouvier F, Pelletier S, Renou JP, Erhardt M, Hayes S, Terry MJ, Genschik P, Achard P. 2011
DELLAs Regulate Chlorophyll and Carotenoid Biosynthesis to Prevent Photooxidative Damage during Seedling Deetiolation in Arabidopsis
Plant Cell WOS:000292079800014
PubMed

Berthet S, Demont-Caulet N, Pollet B, Bidzinski P, Cézard L, Le Bris P, Borrega N, Hervé J, Blondet E, Balzergue S, Lapierre C, Jouanin L. 2011
Disruption of LACCASE4 and 17 Results in Tissue-Specific Alterations to Lignification of Arabidopsis thaliana Stems.
Plant Cell WOS:000289884200025
PubMed

Peltier C, Schmidlin L, Klein E, Taconnat L, Prinsen E, Erhardt M, Heintz D, Weyens G, Lefebvre M, Renou JP, Gilmer D. 2011
Expression of the Beet necrotic yellow vein virus p25 protein induces hormonal changes and a root branching phenotype in Arabidopsis thaliana
Transgenic Research WOS:000290446200002
PubMed

Lozano-Durán R, Rosas-Díaz T, Gusmaroli G, Luna AP, Taconnat L, Deng XW, Bejarano ER. 2011
Geminiviruses Subvert Ubiquitination by Altering CSN-Mediated Derubylation of SCF E3 Ligase Complexes and Inhibit Jasmonate Signaling in Arabidopsis thaliana
Plant Cell WOS:000289884200018
PubMed

Libeau P, Durandet M, Granier F, Marquis C, Berthomé R, Renou JP, Taconnat-Soubirou L, Horlow C. 2011
Gene expression profiling of Arabidopsis meiocytes
Plant Biology WOS:000293564300011
PubMed

Sormani R, Delannoy E, Lageix S, Bitton F, Lanet E, Saez-Vasquez J, Deragon JM, Renou JP, Robaglia C. 2011
Sublethal Cadmium Intoxication In Arabidopsis thaliana Impacts Translation at Multiple Levels
Plant and Cell Physiology WOS:000287254000023
PubMed

Bazin J, Langlade N, Vincourt P, Arribat S, Balzergue S, El-Maarouf-Bouteau H, Bailly C. 2011
Targeted mRNA oxidation regulates sunflower seed dormancy alleviation during dry after-ripening.
Plant Cell WOS:000293224200015
PubMed

Bauer P, Blondet E. 2011
Transcriptome analysis of ein3 eil1 mutants in response to iron deficiency.
Plant Signal Behav
PubMed

Krapp A, Berthomé R, Orsel M, Mercey-Boutet S, Yu A, Castaings L, Elftieh S, Major H, Renou JP, Daniel-Vedele F. 2011
Arabidopsis Roots and Shoots Show Distinct Temporal Adaptation Patterns toward Nitrogen Starvation
Plant Physiology WOS:000296722300024
PubMed

Lingam S, Mohrbacher J, Brumbarova T, Potuschak T, Fink-Straube C, Blondet E, Genschik P, Bauer P. 2011
Interaction between the bHLH transcription factor FIT and ETHYLENE INSENSITIVE3/ETHYLENE INSENSITIVE3-LIKE1 reveals molecular linkage between the regulation of iron acquisition and ethylene signaling in Arabidopsis.
Plant Cell WOS:000292079800012
PubMed

Jay F, Wang Y, Yu A, Taconnat L, Pelletier S, Colot V, Renou JP, Voinnet O. 2011
Misregulation of AUXIN RESPONSE FACTOR 8 Underlies the Developmental Abnormalities Caused by Three Distinct Viral Silencing Suppressors in Arabidopsis
Plos Pathogens WOS:000291014000020
PubMed

Multilevel regulation and signalling processes associated with adaptation to terminal drought in wild emmer wheat.

Funct Integr Genomics. 2010 Mar 24.
Krugman T, Chagué V, Peleg Z, Balzergue S, Just J, Korol AB, Nevo E, Saranga Y, Chalhoub B, Fahima T.
PubMed

 

Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploids.

New Phytol. 2010 Jun 25.
Chagué V, Just J, Mestiri I, Balzergue S, Tanguy AM, Huneau C, Huteau V, Belcram H, Coriton O, Jahier J, Chalhoub B.
PubMed

 

Brain transcriptional stability upon prion protein-encoding gene invalidation in zygotic or adult mouse.

BMC Genomics. 2010 Jul 22 ;11(1):448.
Chadi S, Young R, Le Guillou S, Tilly G, Bitton F, Martin-Magniette ML, Soubigou-Taconnat L, Balzergue S, Vilotte M, Peyre C, Passet B, Beringue V, Renou JP, Le Provost F, Laude H, Vilotte JL.
PubMed

 

Jamet E, Roujol D, San Clemente H, Irshad M, Soubigou-Taconnat L, Renou JP, Pont-Lezica R.
Cell wall biogenesis of Arabidopsis thaliana elongating cells : transcriptomics complements proteomics.

BMC Genomics. 2009 Oct 31 ;10(1):505.
PubMed

 

Florence Jay (1,*), Jean-Pierre Renou (2), Olivier Voinnet (1) and Lionel Navarro (1)
Biotic Stress-Associated microRNAs : Identification, Detection, Regulation, and Functional Analysis.

Methods Mol Biol. 2010 ;592:183-202.
(1) Institut de Biologie Moléculaire des Plantes, CNRS UPR2353 – Université Louis Pasteur, Strasbourg Cedex, France
(2) UMR Génomique Végétale INRA-CNRS-UEVE, 2 rue G.Crémieux, Evry, France
PubMed

 

Ping Hong Meng (1#), Cécile Raynaud (1#*), Guillaume Tcherkez (2), Sophie Blanchet (1), Kamal Massoud (1), Séverine Domenichini (1), Yves Henry (1), Ludivine Soubigou-Taconnat (3), Caroline Lelarge-Trouverie (2), Patrick Saindrenan1, Jean Pierre Renou (3), Catherine Bergounioux (1)
Crosstalks between myo-inositol metabolism, programmed cell death and basal immunity in Arabidopsis.

PLoS One. 2009 Oct 8 ;4(10):e7364.
(1) Institut de Biotechnologie des Plantes, UMR CNRS 8618, Université Paris-Sud XI, bât 630, Plateau de Moulon, Orsay, France
(2) Plateforme Métabolisme Métabolome IFR87, Institut de Biotechnologie des Plantes, Université Paris-Sud XI, bât 630, Plateau du Moulon, Orsay, France
(3) Unité de Recherche en Génomique Végétale, 2, CP5708, Evry, France
PubMed

 

Mainguet SE, Gakière B, Majira A, Pelletier S, Bringel F, Guérard F, Caboche M, Berthomé R, Renou JP.
Uracil Salvage is Necessary for Early Arabidopsis Development.

Plant J. 2009 Jun 29.
- URGV, UMR INRA 1165 - CNRS 8114 - UEVE, 2, rue Gaston Crémieux, CP5708, 91057 Evry cedex, France.
PubMed

 

Elis S, Blesbois E, Couty I, Balzergue S, Martin-Magniette ML, Batellier F, Govoroun MS. 2009.
Identification of germinal disk region derived genes potentially involved in hen fertility
Mol Reprod Dev. 2009 May 29.
PubMed

 

Krinke O, Flemr M, Vergnolle C, Collin S, Renou JP, Taconnat L, Yu A, Burketova L, Valentova O, Zachowski A, Ruelland E.
Phospholipase D activation is an early component of the salicylic acid signaling pathway in Arabidopsis thaliana cell suspensions.

Plant Physiol. 2009 Mar 20.
UPMC Univ Paris 06, Unite de Recherche 5 ;
Centre National de la Recherche Scientifique, Equipe d’Accueil Conventionnee 7180, Laboratoire de Physiologie Cellulaire et Moleculaire des Plantes, Ivry-sur-Seine, F-94200 France ;
Institute of Chemical Technology, Prague, Department of Biochemistry and Microbiology, Prague, 166 28 Czech Republic ;
Unite Mixte de Recherche Institut National de la Recherche Agronomique 1165 ;
Centre National de la Recherche Scientifique 8114, Unite de Recherche en Genomique Vegetale, Evry, F-91057 France ;
Academy of Sciences of the Czech Republic, Institute of Experimental Botany, v.v.i., Prague, 160 00 Czech Republic.
PubMed

 

Besson-Bard A., Gravot A., Richaud P., Auroy P., Gaymard F., Taconnat L., Renou J.P., Pugin A. and Wendehenne D. 2009.
A cadmium induced nitrite oxide production in Arabidopsis thaliana triggers upregulation of genes related to iron uptake and sets up resistance mechanisms through induction of a NAS4 dependant nicotianamide production.

[Nitric Oxide Contributes to Cadmium Toxicity in Arabidopsis by Promoting Cadmium Accumulation in Roots and by Up-Regulating Genes Related to Iron Uptake1,[W]]
Plant Physiology 149:1302-1315, 2009 Jan 23. [First published online January 23, 2009 ; 10.1104/pp.108.133348]
UMR INRA 1088/CNRS 5184/Université de Bourgogne, Plante-Microbe-Environnement, 21065 Dijon cedex, France (A.B.-B., A.P., D.W.) ; UMR 118 Amélioration des Plantes et Biotechnologies Végétales, INRA/Agrocampus Rennes/Université Rennes 1, 35653 Le Rheu cedex, France (A.G.) ; Laboratoire de Bioénergétique et Biotechnologie des Bactéries et Microalgues, SBVME, IBEB, DSV, CEA, CNRS, Université Aix Marseille, 13108 Saint Paul lez Durance, France (P.R., P.A.) ; Laboratoire de Biochimie et Physiologie Moléculaire des Plantes, UMR 5004 Agro-M/CNRS/INRA/UMII, 34060 Montpellier cedex 1, France (C.D., F.G.) ; and Unité de Recherche en Génomique Végétale, UMR 8114 CNRS/INRA/Université d’Evry-Val d’Essonne, 91057 Evry, France (L.T., J.-P.R.)
PubMed

 

Minic Z, Jamet E, San-Clemente H, Pelletier S, Renou JP, Rihouey C, Okinyo DP, Proux C, Lerouge P, Jouanin L. 2009.
Transcriptomic analysis of Arabidopsis developing stems : a close-up on cell wall genes.

BMC Plant Biol. Jan 16 ;9(1):6.

Andrea Pitzschke (a), Armin Djamei (a,b,) Frédérique Bitton (c) and Heribert Hirt (a,c,1)
A Major Role of the MEKK1–MKK1/2–MPK4 Pathway in ROS Signalling

Molecular Plant Advance Access published January 6, 2009 | Molecular Plant • Pages 1–18, 2008
(a) Department of Plant Molecular Biology, Max F. Perutz Laboratories, University of Vienna, Dr.-Bohr-Gasse 9, 1030 Vienna, Austria
(b) Present address : Max-Planck-Institute for Terrestrial Microbiology, Karl-von-Frisch-Strasse, 35043 Marburg, Germany
(c) URGV Plant Genomics Laboratory, 2 Rue Gaston Cre´ mieux, 91057 Evry, France
(1) To whom correspondence should be addressed. E-mail hirt@evry.inra.fr
molecular plant
PubMed

 

Depuydt S, Trenkamp S, Fernie AR, Elftieh S, Renou JP, Vuylsteke M, Holsters M, Vereecke D.
An integrated genomics approach to define niche establishment by Rhodococcus fascians.

Plant Physiol. 2008 Dec 31. [Epub ahead of print]
Department of Plant Systems Biology, Flanders Institute for Biotechnology, 9052 Gent, Belgium ;
Department of Molecular Genetics, Ghent University, 9052 Gent, Belgium ;
Max-Planck Institute of Molecular Plant Physiology, University of Potsdam, 14476 Potsdam-Golm, Germany ;
Unite Mixte de Recherche en Genomique Vegetale, Institut National de la Recherche
Agronomique, F-91057, Evry, France.
PubMed

 

Bashandy T, Taconnat L, Renou JP, Meyer Y, Reichheld JP.
Accumulation of Flavonoids in an ntra ntrb Mutant Leads to Tolerance to UV-C.

Mol Plant. 2009 Mar ;2(2):249-58. Epub 2008 Oct 29.
Laboratoire Génome et Développement des Plantes, Université de Perpignan, UMR CNRS 5096, 52 avenue Paul Alduy, 66860 Perpignan, France.

 

Bouchabke-Coussa O, Quashie ML, Seoane-Redondo J, Fortabat MN, Gery C, Yu A, Linderme D, Trouverie J, Granier F, Teoule E, Durand-Tardif M. 2008
ESKIMO1 is a key gene involved in water economy as well as cold acclimation and salt tolerance.

BMC Plant Biol. Dec 7 ;8(1):125.

Loizeau K, De Brouwer V, Gambonnet B, Yu A, Renou JP, Van Der Straeten D, Lambert WE, Rebeille F, Ravanel S.
A genome-wide and metabolic analysis determined the adaptive response of Arabidopsis cells to folate depletion induced by methotrexate.

Plant Physiol. 2008 Oct 17.
Laboratoire de Physiologie Cellulaire Vegetale, UMR5168 CNRS-CEA-INRA-Universite Joseph Fourier Grenoble I, Institut de Recherches en Technologies et Sciences pour le Vivant, CEA-Grenoble, 17 rue des Martyrs, F-38054 Grenoble Cedex 9, France,
Laboratory of Toxicology, Ghent University, Harelbekestraat 72, B-9000 Ghent, Belgium,
UMR INRA1165 CNRS8114 UEVE, Unite de Recherche en Genomique Vegetale, 2 rue Gaston Cremieux, CP5708, F-91057 Evry, France,
Unit Plant Hormone Signaling and Bio-imaging, Department of Molecular Genetics, Ghent University, K.L. Ledeganckstraat 35, B-9000 Ghent, Belgium.
PubMed

 

Castaings L, Camargo A, Pocholle D, Gaudon V, Texier Y, Boutet-Mercey S, Taconnat L, Renou JP, Daniel-Vedele F, Fernandez E, Meyer C, Krapp A.
The nodule inception-like protein 7 modulates nitrate sensing and metabolism in Arabidopsis.

Plant J. 2008 Sep 26.
IJPB, Unité de Nutrition Azotée des Plantes, INRA, route de St. Cyr, F-78026 Versailles Cedex, France.
PubMed

 

Benhamed M, Martin-Magniette ML, Taconnat L, Bitton F, Servet C, De Clercq R, De Meyer B, Buysschaert C, Rombauts S, Villarroel R, Aubourg S, Beynon J, Bhalerao RP, Coupland G, Gruissem W, Menke FL, Weisshaar B, Renou JP, Zhou DX, Hilson P.
Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.

Plant J. 2008 Jul 4.
Institut de Biotechnologie des Plantes, UMR 8618, Centre National de la Recherche Scientifique, Université de Paris Sud 11, 91405 Orsay, France.
PubMed

Patricia Merigout , Maud Lelandais , Frédérique Bitton , Jean-Pierre Renou , Xavier Briand , Christian Meyer , and Francoise Daniel-Vedele
Physiological and transcriptomic aspects of urea uptake and assimilation in Arabidopsis plants.

Plant Physiology Preview, Published on May 28, 2008 ; 10.1104/pp.108.119339,
INRA, IJPB, Unité de Nutrition Azotee des Plantes, F-78000 Versailles, France ; INRA, Unité Mixte de Recherche en Génomique Végétale, F-91057 Evry, France ; BiotechMarine BP 65, 22260 Pontrieux, France
PubMed

 

Marie-Laure Martin-Magniette*¹², Julie Aubert¹, Avner Bar-Hen (4), Samira Elftieh² , Frederic Magniette³, Jean-Pierre Renou² and Jean-Jacques Daudin¹
Normalization for triple-target microarray experiments

BMC Bioinformatics. 2008 Apr 28 ;9(1):216
¹ UMR AgroParisTech-INRA MIA 518, 75231 Paris Cedex05, France
² UMR INRA 1165-CNRS 8114-UEVE URGV, 91057 Evry Cedex, France
³ Unit´e MOY300, D´el´egation CNRSˆIle de France Est, 94532 Thiais Cedex, France
Universite Paris Descartes, MAP 5, PARIS cedex 06, France
* Corresponding author
PubMed

 

Achard P, Jean-Pierre Renou, Berthomé R, Harberd NP, Genschik P.
Plant DELLAs Restrain Growth and Promote Survival of Adversity by Reducing the Levels of Reactive Oxygen Species.

Curr Biol. 2008 Apr 30
Institut de Biologie Moléculaire des Plantes, Conventionné avec l’Université Louis Pasteur, 67084 Strasbourg, France.
Unité de Recherche en Génomique Végétale (URGV), 91057 Evry cedex, France
University of Oxford, Department of Plant Sciences, South Parks Road, Oxford OX1 3RB, United Kingdom
PubMed

 

Chavez Montes RA, Ranocha P, Martinez Y, Minic Z, Jouanin L, Marquis M, Saulnier L, Fulton LM, Cobbett CS, Bitton F, Renou JP, Jauneau A, Goffner D. 2008
Cell wall modifications in Arabidopsis thaliana plants with altered alpha-Larabinofuranosidase activity.

Plant Physiol. 2008 Mar 14
UMR 5546 CNRS-UPS "Surfaces Cellulaires et Signalisation chez les Vegetaux", 24 chemin de Borde Rouge, BP 42617 Auzeville, 31326 Castanet-Tolosan, France ;
Laboratoire de Biologie Cellulaire, Institut National de la Recherche Agronomique, Route de St-Cyr, 78026 Versailles Cedex, France ;
Biopolymeres Interactions Assemblages, Unite de Recherche sur les Polysaccharides leurs Organisations et Interactions, Institut National de la Recherche Agronomique, BP 71627, 44316 Nantes Cedex 03, France ;
Department of Genetics, University of Melbourne, Victoria 3010, Australia ;
Unité de Recherche en Génomique Végétale INRA-CNRS, 2 rue Gaston Crémieux, CP 5708, 91057 Evry cedex, France.
PubMed

 

Elis S., Batellier F., Couty I., Balzergue S., Martin-Magniette M.L., Monget P., Blesbois E. and Govoroun M.S. 2008.
Search for the genes involved in oocyte maturation and early embryo development in the hen.
BMC Genomics. 29 ;9(1):110
PubMed

 

Cossegal M., Chambrier P., Mbelo S., Balzergue S., Martin-Magniette M.L., Moing A., Deborde C., Guyon V., Perez P., Rogowsky P. 2008.

Transcriptional and metabolic adjustments in AGPase deficient bt2 maize kernels.
Plant Physiol. 146(4):1553-70.
PubMed

 

Ruffel S., Freixes S., Balzergue S., Tillard P., Jeudy C., Martin-Magniette M.L., van der Merwe M.J., Kakar K., Gouzy J., Fernie A.R., Udvardi M., Salon C., Gojon A., Lepetit M. 2008.

Systemic signaling of the plant N status triggers specific transcriptome responses depending on the N source in Medicago truncatula.
Plant Physiol. 146(4):2020-35.
PubMed

 

Fabienne Cartieaux (1), Céline Contesto (1), Adrien Gallou (1), Guilhem Desbrosses (1), Joachim Kopka (2), Ludivine Taconnat (3), Jean-Pierre Renou (3), and Bruno Touraine (1)
Simultaneous Interaction of Arabidopsis thaliana with Bradyrhizobium Sp. Strain ORS278 and Pseudomonas syringae pv. tomato DC3000 Leads to Complex Transcriptome Changes.

Molecular Plant Microbe Interactions 2008 Feb ;21(2):244-59.
(1) Laboratoire des Symbioses Tropicales et Méditerranéennes (UMR113, Université Montpellier, Institut de Recherche pour le Développement, Cirad, Ecole Nationale Supérieure d’Agronomie de Montpellier, INRA
(2) Max Planck Institute of Molecular Plant Physiology, Am Muhlenberg 1, 14476 Golm, Germany ;
(3) URGV (UMR 8114 CNRS, INRA, Université d’Evry-Val d’Essonne), Evry, France
PubMed

 

Lin Xu, Zhong Zhao, Aiwu Dong, Ludivine Soubigou-Taconnat, Jean-Pierre Renou, Andre Steinmetz, and Wen-Hui Shen
Di- and tri- but not mono-methylation on histone H3 lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana

Mol Cell Biol. 2007 Dec 10
Institut de Biologie Moléculaire des Plantes (IBMP), Centre National de la Recherche Scientifique (CNRS), Université Louis Pasteur de Strasbourg (ULP), Strasbourg, France ; Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai, China ; URGV, UMR INRA 1165 - CNRS 8114 – UEVE, France ; CRP-Santé, Luxembourg ;
PubMed

 

Ramel F (1), Sulmon C (1) Cabello-Hurtado F (1), Taconnat L (2), Martin-Magniette ML (2, 3), Jean-Pierre Renou (2), Elamrani A (1), Couee I (1), Gouesbet G. (1)
Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana : novel insights into atrazine toxicity and sucrose-induced tolerance.

Transcriptome profiling reveals the apoptotic effects of the herbicide atrazine and large-scale protective effects of sucrose signaling in Arabidopsis thaliana plantlets.

BMC Genomics. 2007 Dec 5 ;8(1):450
(1) CNRS, Université de Rennes 1, UMR 6553 ECOBIO, France
(2) UMR INRA 1165-CNRS 8114-UEVE, Unité de Recherche en Génomique Végétale (URGV),Evry, France
(3) UMR AgroParisTech-INRA, Mathématique et Informatique Appliquées 518, Paris, France
PubMed

 

Ribot C., Hirsch J., Balzergue S., Tharreau D., Nottéghem J.L., Lebrun M.H., Morel J.B. 2007.
Susceptibility of rice to the blast fungus, Magnaporthe grisea.

J Plant Physiol. 165(1):114-24

Sébastien Aubourg, Martin-Magniette ML, Brunaud V, Taconnat L, Bitton F, Balzergue S, Jullien PE, Ingouff M, Thareau V, Schiex T, Alain Lecharny, Jean-Pierre Renou
Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome.

BMC Genomics. 2007 Nov 2 ;8(1):401
PubMed

 

Sclep G, Allemeersch J, Liechti R, De Meyer B, Beynon J, Bhalerao R, Moreau Y, Nietfeld W, Jean-Pierre Renou, Reymond P, Kuiper MT, Hilson P.
CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes.

BMC Bioinformatics. 2007 Oct 18 ;8:400.
PubMed

 

Gagnot S, Tamby JP, Martin-Magniette ML, Bitton F, Taconnat L, Balzergue S, Sébastien Aubourg, Alain Lecharny, Jean-Pierre Renou, Brunaud V.
CATdb : a public access to Arabidopsis transcriptome data from the URGV-CATMA platform.

Nucleic Acids Res. 2007 Oct 16
URGV - UMR INRA 1165-CNRS 8114-UEVE, Laboratoire de Biologie Cellulaire - Institut J.P. Bourgin - INRA Centre de Versailles-Grignon, Versailles, France,
Unité de Mathématiques et Informatique Appliquées (MIA) - UMR 518 AgroParisTech-INRA, Paris
Université Paris-Sud, Institut de Biotechnologie des Plantes (IBP) - UMR CNRS UPS, Orsay, France.
PubMed

 

Ondrej Krinke, Eric Ruelland, Olga Valentová, Chantal Vergnolle, Jean-Pierre Renou, Ludivine Taconnat, Matyás Flemr, Lenka Burketová, and Alain Zachowski, 2007
Phosphatidylinositol 4-kinase Activation Is an Early Response to Salicylic Acid in Arabidopsis Suspension Cells

Plant Physiol. 2007 Jul ;144(3):1347-59. Epub 2007 May 11.
Université Pierre et Marie Curie-Paris 6 and Centre National de la Recherche Scientifique, Unité Mixte de Recherche 7180, Laboratoire de Physiologie Cellulaire et Moléculaire des Plantes, Ivry-sur-Seine, France. ondrej.krinke@vscht.cz
PubMed

 

Ricaud L, Proux C, Renou JP, Pichon O, Fochesato S, Ortet P, Montane MH. May 2007
ATM-Mediated Transcriptional and Developmental Responses to gamma-rays in Arabidopsis.

PLoS ONE. 2007 May 9 ;2(5):e430.
CEA, DSV, Institut de Biologie Environnementale et de Biotechnologie (iBEB), Service de biologie végétale et de microbiologie environnementales (SBVME), Cadarache, Saint Paul-lez-Durance, France.
PubMed

 

Zhu Y, Dong A, Meyer D, Pichon O, Renou JP, Cao K, Shen WH.
Arabidopsis NRP1 and NRP2 Encode Histone Chaperones and Are Required for Maintaining Postembryonic Root Growth.
Root tip and stem-root junction region, respectively, from a transgenic Arabidopsis plant expressing YFP:NRP1.

Plant Cell. 2006 Nov ;18(11):2879-92. Epub 2006 Nov 22.
Institut de Biologie Moléculaire des Plantes, Laboratoire Propre du Centre National de la Recherche Scientifique, Unité Propre de Recherche 2357, Conventioné avec l’Université Louis Pasteur, Strasbourg, France.
PubMed

 

Masclaux-Daubresse C, Purdy S, Lemaitre T, Pourtau N, Taconnat L, Renou JP and Wingler A. 2007.
Genetic variation suggests an interaction between cold acclimation and the metabolic regulation of leaf senescence.
Figure 3. Function of genes affected by Glc independent of the genetic background

Plant Physiol. 2007 Jan ;143(1):434-46. Epub 2006 Nov 10.
Unité de Nutrition Azotée des Plantes, Institut National de la Recherche Agronomique, Versailles, France.
PubMed

 

Manavella PA, Arce AL, Dezar CA, Bitton F, Renou JP, Crespi M, Chan RL.
Cross-talk between ethylene and drought signalling pathways is mediated by the sunflower Hahb-4 transcription factor.

[Analysis of transcriptional networks regulated by the sunflower Hahb-4 transcription factor in Arabidopsis revealed a conserved role in ethylene signaling.]

Plant J. 2006 Oct ;48(1):125-37.
Cátedra de Biología Celular y Molecular, Facultad de Bioquímica y Ciencias Biológicas, Universidad Nacional del Litoral, CONICET, Santa Fe, Argentina.
Figure 2. Transgenic plants enter into the senescence program later and are insensitive to ethylene.
PubMed

 

Herbette S., Taconnat L., Hugouvieux V, Martin-Magniette M.L., Cuine S., Auroy P., Richaud P., Forestier C., Bourguignon J. Renou JP , Vavasseur A. and Leonhart N.2006.
Genome-wide transcriptome profiling of the early cadmium response of Arabidopsis roots and shoots.

Biochimie. 2006 Nov ;88(11):1751-65. Epub 2006 Jun 6.
CEA Cadarache, DSV/DEVM/Laboratoire des Echanges Membranaires et Signalisation, UMR 6191 CNRS-CEA-Aix-Marseille-II, 13108 Saint-Paul-les-Durance cedex, France.
PubMed

 

Ferrario-Mery S., Besin E., Pichon O., Meyer C., Hodges M. 2006.
The regulatory PII protein controls arginine biosynthesis in Arabidopsis.

FEBS Lett. Apr 3 ;580(8):2015-20.

Guyomarch’s S, Benhamed M, Lemonnier G, Renou JP, Zhou DX and Delarue M. 2006.
MGOUN3 : evidence for chromatin-mediated regulation of FLC expression.

J Exp Bot. 2006 ;57(9):2111-9. Epub 2006 May 25.
Institut de Biotechnologie des Plantes, UMR CNRS 8618, Bât. 630. Université Paris XI, Orsay, France.
Journal of Experimental Botany
PubMed

 

Abdulrazzak N, Pollet B, Ehlting J, Larsen K, Asnaghi C, Ronseau S, Proux C, Erhardt M, Seltzer V, Renou JP, Ullmann P, Pauly M, Lapierre C & Werck-Reichhart D. 2006.
A coumaroyl-ester-3- hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth.

Plant Physiol. 2006 Jan ;140(1):30-48. Epub 2005 Dec 23.
Department of Plant Metabolic Responses , Institute of Plant Molecular Biology Centre National de la Recherche Scientifique-Unité Propre de Recherche 2357, Université Louis Pasteur, 67000 Strasbourg, France.
PubMed

 

Vergnolle C, Vaultier MN, Taconnat L, Renou JP, Kader JC, Zachowski A, Ruelland E.
The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions.

Plant Physiol. 2005 Nov ;139(3):1217-33. Epub 2005 Oct 28.
Laboratoire de Physiologie Cellulaire et Moléculaire des Plantes, Formation de Recherche en Evolution 2846, Centre National de la Recherche Scientifique/Université Pierre et Marie Curie, F-94200 Ivry-sur-Seine, France.
PubMed

 

Jammes F, Lecomte P, de Almeida-Engler J, Bitton F, Martin-Magniette ML, Renou JP, Abad P, Favery B.
Genome-wide expression profiling of the host response to root-knot nematode infection in Arabidopsis.

Plant J. 2005 Nov ;44(3):447-58.
UMR INRA 1064-UNSA-CNRS 6192, Interactions Plantes-Microorganismes et Santé Végétale, 400 route des Chappes, BP 167, 06903 Sophia Antipolis, France.
PubMed

 

Pineau C, Freydier A, Ranocha P, Jauneau A, Turner S, Lemonnier G, Renou JP, Tarkowski P, Sandberg G, Jouanin L, Sundberg B, Boudet AM, Goffner D, Pichon M.
hca : An Arabidopsis mutant exhibiting unusual cambial activity and altered vascular patterning.

Plant J. 2005 Oct ;44(2):271-89.
Surfaces Cellulaires et Signalisation chez les Végétaux, Unité Mixte de Recherche, Centre National de la Recherche Scientifique - Université Paul Sabatier 5546, Pôle de Biotechnologie Végétale, 31326 Castanet Tolosan, France.
Figure 5. hca/cov1 morphology and vasculature organization.
PubMed

 

Bertrand C, Benhamed M, Li YF, Ayadi M, Lemonnier G, Renou JP, Delarue M, Zhou DX.
Arabidopsis HAF2 gene encoding TATA-binding protein (TBP)-associated factor TAF1, is required to integrate light signals to regulate gene expression and growth.

J Biol Chem. 2005 Jan 14 ;280(2):1465-73. Epub 2004 Nov 3.
Institut de Biotechnologie des Plantes, UMR8618, Université Paris-sud XI, 91405 Orsay, France.
PubMed

 

Dieterle M, Thomann A, Renou JP, Parmentier Y, Cognat V, Lemonnier G, Muller R, Shen WH, Kretsch T, Genschik P.
Molecular and functional characterization of Arabidopsis Cullin 3A

Plant J. 2005 Feb ;41(3):386-99.
Institut de Biologie Moléculaire des Plantes du CNRS, Strasbourg, France.
PubMed

 

Hilson P, Allemeersch J, Altmann T, Aubourg S, Avon A, Beynon J, Bhalerao RP, Bitton F, Caboche M, Cannoot B, Chardakov V, Cognet-Holliger C, Colot V, Crowe M, Darimont C, Durinck S, Eickhoff H, de Longevialle AF, Farmer EE, Grant M, Kuiper MT, Lehrach H, Leon C, Leyva A, Lundeberg J, Lurin C, Moreau Y, Nietfeld W, Paz-Ares J, Reymond P, Rouze P, Sandberg G, Segura MD, Serizet C, Tabrett A, Taconnat L, Thareau V, Van Hummelen P, Vercruysse S, Vuylsteke M, Weingartner M, Weisbeek PJ, Wirta V, Wittink FR, Zabeau M, Small I.
Versatile gene-specific sequence tags for Arabidopsis functional genomics : transcript profiling and reverse genetics applications.

Genome Res. 2004 Oct ;14(10B):2176-89.
Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology (VIB), Ghent University, B-9052 Gent, Belgium.
PubMed

 

Lurin C, Andres C, Aubourg S, Bellaoui M, Bitton F, Bruyere C, Caboche M, Debast C, Gualberto J, Hoffmann B, Lecharny A, Le Ret M, Martin-Magniette ML, Mireau H, Peeters N, Renou JP, Szurek B, Taconnat L, Small I.
Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.

Plant Cell. 2004 Aug ;16(8):2089-103. Epub 2004 Jul 21.
URGV, INRA, CNRS, Université d’Evry Val d’Essone
PubMed